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COMMENT ON NATIONAL STANDARD METHODS
KEY:
I = Issued
UR / I = Issued and Under Review
UR = Under Review
D = Draft
WD = Withdrawn
C = Contact Standards Unit
National Standard Methods - Bacteriology SOPs
Some National Standard Methods are available in Italian
Ref No |
Title |
Status |
Issue No |
Issue Date |
Investigation of ear swabs and associated specimens |
I |
8.1 |
Mar 08 |
|
Investigation of eye swabs and canalicular pus |
I |
5 |
Mar 08 |
|
Investigation of mouth swabs |
I |
6 |
Feb 08 |
|
Investigation of nose swabs |
I |
6 |
Feb 08 |
|
Investigation of specimens for Bordetella species |
I |
6.1 |
May 05 |
|
Investigation of throat swabs |
I |
7 |
Jul 08 |
|
Processing of faeces for Clostridium difficile |
I |
1.3 |
Sep 08 |
|
Investigation of skin, superficial, and non-surgical wound swabs |
I |
4.1 |
Aug 06 |
|
Investigation of abscesses and post-operative wound and deep-seated wound infections |
UR |
N/A |
N/A |
|
Investigation of bile |
I |
5 |
Apr 08 |
|
Investigation of tissues and biopsies |
UR |
N/A |
N/A |
|
Investigation of sinus aspirate |
UR |
N/A |
N/A |
|
Investigation of intravascular cannulae and associated specimens |
I |
5 |
May 08 |
|
Investigation of cerebrospinal fluid shunts |
UR |
N/A |
N/A |
|
Investigation of gastric aspirates and infection screen swabs from neonates |
UR |
N/A |
N/A |
|
Investigation of continuous ambulatory peritoneal dialysis fluid |
UR |
N/A |
N/A |
|
Investigation of fluids from normally sterile sites |
UR |
N/A |
N/A |
|
Investigation of cerebrospinal fluid |
I |
5 |
Apr 08 |
|
Investigation of genital tract and associated specimens |
I |
4.1 |
May 05 |
|
Investigation of specimens for screening for MRSA |
I |
5 |
Jul 07 |
|
Investigation of faeces specimens for bacterial pathogens |
I |
6 |
Sep 07 |
|
Investigation of specimens other than blood for parasites |
I |
3 |
Jul 08 |
|
Investigation of Specimens For Ectoparasites |
I |
1 |
Jun 06 |
|
Investigation of blood cultures (for organisms other than Mycobacterium species) |
I |
5 |
Aug 05 |
|
Investigation of Bone Marrow |
I |
1 |
Nov 07 |
|
Investigation of dermatological specimens for superficial mycoses |
I |
1 |
Mar 07 |
|
Investigation of specimens for Mycobacterium species |
I |
5 |
Jul 06 |
|
Investigation of Urine |
I |
6 |
May 08 |
|
Investigation of bone and soft tissue associated with Osteomyelitis |
D |
N/A |
N/A |
|
Investigation of Prosthetic Joint Infection samples |
D |
N/A |
N/A |
|
Susceptibility Testing |
I |
2 |
Oct 06 |
|
Investigation of specimens for Legionella species |
UR |
N/A |
N/A |
|
Screening for Meningococci |
UR |
N/A |
N/A |
|
Investigation of intraocular fluids and corneal scrapings |
I |
5 |
Apr 08 |
|
Investigation of gastric biopsies for Helicobacter pylori |
I |
5 |
Aug 08 |
|
Investigation of Bronchoalveolar Lavage, Sputum and Associated Specimens |
I |
2.1 |
Jul 08 |
|
Processing Swabs For Group B Streptococcal Carriage |
I |
2.1 |
Jun 06 |
Number of Issued Bacteriology SOPs: 26
National Standard Methods - Bacteriology Identification
Ref No |
Title |
Status |
Issue No |
Issue Date |
Introduction to the preliminary identification of medically important bacteria |
I |
1.4 |
Feb 08 |
|
Identification of Corynebacterium species |
I |
3 |
Jul 08 |
|
Identification of Listeria species, non-toxigenic Corynebacterium species and other non-sporing gram-positive rods |
I |
2 |
Oct 07 |
|
Identification of Streptococcus species, Enterococcus species and morphologically similar organisms |
I |
2.1 |
Sep 07 |
|
Identification of Bordetella pertussis and Bordetella parapertussis from selective agar |
I |
2.1 |
Sep 07 |
|
Identification of Neisseria species |
UR |
N/A |
N/A |
|
Identification of Staphylococcus species, Micrococcus species and Rothia species |
I |
2.1 |
Sep 07 |
|
Identification of Clostridium species |
I |
3 |
Jul 08 |
|
Identification of Bacillus species |
I |
2.1 |
Sep 07 |
|
Identification of aerobic Actinomycetes species |
D |
N/A |
N/A |
|
Identification of Moraxella species and morphologically similar organisms |
I |
2 |
Aug 07 |
|
Identification of Haemophilus species and the HACEK group of organisms |
UR |
N/A |
N/A |
|
Identification of Pasteurella species and morphologically similar bacteria |
I |
2.1 |
Sep 07 |
|
Identification of non-sporing, non-branching anaerobes |
D |
N/A |
N/A |
|
Identification of anaerobic Actinomycetes species |
D |
N/A |
N/A |
|
Identification of Enterobacteriaceae |
I |
2 |
Nov 07 |
|
Identification of glucose non-fermenting Gram-negative rods |
I |
2 |
Apr 07 |
|
Identification of Legionella species |
I |
2 |
Nov 07 |
|
Identification of Vibrio species |
I |
2 |
Nov 07 |
|
Identification of Shigella species |
I |
2 |
Nov 07 |
|
Identification of Yersinia species from faeces |
I |
2 |
Nov 07 |
|
Identification of Escherichia coli O157 |
I |
2 |
Nov 07 |
|
Identification of Campylobacter species |
I |
2 |
Nov 07 |
|
Identification of Salmonella species |
I |
2.1 |
Sep 08 |
|
Identification of anaerobic Gram-negative rods |
D |
N/A |
N/A |
|
Identification of Helicobacter species |
I |
2 |
Feb 08 |
Number of Issued Bacteriology ID SOPs: 20
National Standard Methods - Food
Ref No |
Title |
Status |
Issue No |
Issue Date |
Preparation of Samples and Dilutions |
I |
1.4 |
May 05 |
|
Aerobic Plate Count at 30°C: Surface Plate Method |
I |
1.4 |
May 05 |
|
Aerobic Plate Count at 30°C: Spiral Plate Method |
I |
1.4 |
May 05 |
|
Enumeration of Staphylococcus aureus |
I |
1.4 |
May 05 |
|
Detection of Salmonella species |
I |
3.1 |
Jul 08 |
|
Enumeration of Clostridium perfringens |
I |
2.4 |
May 05 |
|
Enumeration of Bacillus cereus and other Bacillus species |
I |
1.4 |
May 05 |
|
Enumeration of Escherichia coli in Raw Molluscs by the Multiple Tube Technique |
I |
4.2 |
May 05 |
|
Detection of Escherichia coli O157 by Automated Immunomagnetic Bead Separation |
I |
3 |
May 08 |
|
Detection and Enumeration of Enterobacteriaceae |
I |
1 |
Dec 05 |
|
Detection and Enumeration of Listeria monoctyogenes & other Listeria species |
I |
2 |
Dec 07 |
|
Direct Enumeration of Escherichia coli |
I |
1.4 |
May 05 |
|
Detection of Campylobacter species |
I |
2.1 |
Aug 08 |
|
Enumeration of ß-glucuronidase positive Escherichia coli - Most Probable Number method |
I |
1 |
Dec 05 |
|
Enumeration of Enterobacteriaceae by the Colony Count Technique |
I |
1.4 |
May 05 |
Number of Issued Food SOPs: 15
National Standard Methods - Guidance Notes
Ref No |
Title |
Status |
Issue No |
Issue Date |
|
| QSOP 2 |
Local document control of documents issued by Technical Services. The Health Protection Agency | UR / I |
4.2 |
Sep 05 |
|
| QSOP 4 |
Uncertainty of Measurement in Testing | I |
5 |
Aug 05 |
|
| QSOP 5 |
Handling and transport of samples (for the purposes of UKAS accreditation) | UR / I |
3.2 |
Sep 05 |
|
| QSOP 10 |
Traceability and use of thermometers in UKAS accredited laboratories | I |
4 |
Aug 07 |
|
| QSOP 12 |
Avoiding cross-contamination risks in the food laboratory | UR / I |
4.2 |
Sep 05 |
|
| QSOP 13 |
Auditing in Health Protection Agency laboratories | UR |
N/A |
N/A |
|
| QSOP 17 |
Handling of formal food samples in the laboratory | I |
4.1 |
Aug 05 |
|
| QSOP 18 |
Recommended minimum internal quality control in food microbiology testing laboratories | UR / I |
4.2 |
Sep 05 |
|
| QSOP 19 |
Specification for food and dairy products request forms | I |
4.1 |
Aug 05 |
|
| QSOP 20 |
Specification and standard comments for dairy products report forms | I |
4.1 |
Aug 05 |
|
| QSOP 21 |
Specification and standard comments for food report forms | UR / I |
3.2 |
Sep 05 |
|
| QSOP 22 |
Minimum performance testing requirements for food and dairy standard methods | UR / I |
3.2 |
Sep 05 |
|
| QSOP 23 |
Commercial and in-house diagnostic tests: Evaluations and Validations | I |
4.1 |
Sep 08 |
|
| QSOP 27 |
Quality assurance in the diagnostic virology and serology laboratory | I |
5.1 |
Jul 08 |
|
| QSOP 29 |
Protocol for involvement of HPA Laboratories and staff in the investigation of food, dairy products and waterborne disease | UR / I |
3.2 |
Sep 05 |
|
| QSOP 30 |
Laboratory diagnosis of legionella infections in the HPA | WD |
N/A |
N/A |
|
| QSOP 31 |
Surveillance of polio in the UK | I |
3.3 |
Nov 05 |
|
| QSOP 33 |
European Directive on in vitro diagnostic medical devices (98/79/EC) | I |
4.1 |
Oct 08 |
|
| QSOP 36 |
Corrective and preventive action | I |
4 |
Jan 07 |
|
| QSOP 37 |
Procedure for dealing with presumptive pathogens isolated from ready-to-eat foods | I |
4.1 |
Aug 05 |
|
| QSOP 38 |
Good laboratory practice when performing molecular amplification assays | I |
3 |
Aug 06 |
|
| QSOP 39 |
Food and water law sources for food, water and environmental laboratories | UR / I |
4.1 |
Sep 05 |
|
| QSOP 42 |
Microbiological examination of cerebrospinal fluid from patients with suspected prion disease | UR |
N/A |
N/A |
|
| QSOP 44 |
Microbiological investigation of patients with acute lymphadenopathy and fever | UR |
N/A |
N/A |
|
| QSOP 45 |
Installation, operation, maintenance and performance testing of the Dynal Bead Retriever | I |
2.1 |
Apr 08 |
|
| QSOP 46 |
Aminoglycoside and glycopeptide assays in clinical microbiology laboratories | I |
1 |
Jan 07 |
|
| QSOP 47 |
Chlamydial Zoonotic Infections | D |
N/A |
N/A |
|
| QSOP 48 |
Investigation of Viral Encephalitis and Meningitis | UR |
N/A |
N/A |
|
| QSOP 49 |
Safe use of plastic bags for incubation of food samples | I |
1.1 |
Oct 07 |
|
| QSOP 50 |
Requirements of Food Examiners, Experts Witnesses and Witnessess of Fact Acting For/On Behalf of the Health Protection Agency | I |
1.2 |
Aug 05 |
|
| QSOP 51 |
Laboratory detection and reporting of bacteria with extended spectrum ß-Lactamases | I |
2.2 |
May 08 |
|
| QSOP 52 |
Inoculation of culture media (formerly BSOP 54) | I |
1 |
Feb 08 |
|
| QSOP 53 |
Recommendations for the screening of specimens for Corynebacterium species | I |
2.1 |
Sep 08 |
|
| QSOP 55 |
Investigation of Vesicular Rashes | UR |
N/A |
N/A |
|
| QSOP 56 |
Investigation of Red Rash | I |
1 |
Jan 07 |
|
| QSOP 57 |
The Microbiological Examination of Water Samples | UR / I |
2 |
Dec 05 |
|
| QSOP 58 |
Presumptive diagnosis of Enterobacter sakazakii infection associated with powdered infant formula | UR |
N/A |
N/A |
|
| QSOP 59 |
Investigation of Toxoplasma Infection in pregnancy | I |
1 |
Nov 06 |
|
| QSOP 60 |
Respiratory viruses | I |
1 |
Aug 08 |
|
| QSOP 63 |
Assessment of point of care tests in Microbiology | D |
N/A |
N/A |
Number of Issued Guidance Notes SOPs: 31
National Standard Methods - Test Procedures
Ref No |
Title |
Status |
Issue No |
Issue Date |
Control organisms for National Standard Method BSOP Test Procedures |
D |
N/A |
N/A |
|
Aesculin hydrolysis test |
I |
1.1 |
May 05 |
|
Agglutination test |
UR |
1.1 |
May 05 |
|
Bile solubility test |
UR |
1.1 |
May 05 |
|
Catalase test |
UR |
1.2 |
Jun 06 |
|
Coagulase test |
UR |
3 |
Oct 05 |
|
Deoxyribonuclease test |
UR |
1.1 |
May 05 |
|
Indole test |
UR |
1.1 |
May 05 |
|
Motility test |
UR |
1.1 |
May 05 |
|
Nagler test |
UR |
1.1 |
May 05 |
|
ONPG (ß-galactosidase) test |
UR |
1.1 |
May 05 |
|
Optochin test |
UR |
N/A |
N/A |
|
Oxidase test |
UR |
N/A |
N/A |
|
Oxidation and fermentation of glucose test |
UR |
N/A |
N/A |
|
Porphyrin synthesis (ala) test |
UR |
N/A |
N/A |
|
Potassium hydroxide test |
UR |
N/A |
N/A |
|
Changing the phase of Salmonella test |
UR |
N/A |
N/A |
|
Thermonuclease activity test |
UR |
N/A |
N/A |
|
Urease test |
UR |
N/A |
N/A |
|
X and V factor test |
UR |
N/A |
N/A |
|
Staining Procedures |
I |
1 |
Mar 07 |
Number of Issued Test Procedures SOPs: 2
National Standard Methods - Milk and Dairy
Ref No |
Title |
Status |
Issue No |
Issue Date |
Preparation of samples and decimal dilutions |
I |
2.4 |
May 05 |
|
Plate count test at 30°C |
I |
3.1 |
May 05 |
|
Plate count test at 21°C (pre-incubated) |
I |
3.1 |
May 05 |
|
Enumeration of coliforms - colony count at 30°C |
I |
2.4 |
May 05 |
|
Enumeration of coliforms and presumptive Escherichia coli by the most probable number (MPN) technique |
I |
2.4 |
May 05 |
|
Determination of peroxidase activity (Storch test) in milk |
I |
2.4 |
May 05 |
|
Determination of alkaline Phosphatase Activity in Pasteurised Milk and Cream - Fluorimetric Method |
I |
1.4 |
May 05 |
Number of Issued Milk and Dairy SOPs: 7
National Standard Methods - Virology
Ref No |
Title |
Status |
Issue No |
Issue Date |
Gastroenteritis: sporadic cases |
I |
5 |
Jul 07 |
|
Gastroenteritis: Outbreaks |
I |
6 |
Aug 07 |
|
Hepatitis B diagnostic serology in the immunocompetent (including Hepatitis B in pregnancy |
UR / I |
4.1 |
June 03 |
|
Investigation of Hepatitis C Infection |
UR |
N/A |
N/A |
|
Hepatitis, jaundice and abnormal LFTs |
I |
2.2 |
Nov 05 |
|
Vertical HCV transmission algorithm |
I |
1 |
Nov 07 |
|
Blood borne virus testing in dialysis patients |
I |
1 |
Feb 08 |
|
Anti-HIV Screening |
UR |
N/A |
N/A |
|
Preparation of coated grids for electron microscopy |
I |
5.1 |
Aug 06 |
|
Electron Microscopy: Flotation (direct) method |
I |
5 |
Feb 07 |
|
Electron Microscopy: Differential Centrifugation (double-spin method) |
I |
5 |
Feb 07 |
|
Electron microscopy: ammonium sulphate precipitation |
I |
5 |
Sep 07 |
|
Investigation of clinical specimens by electron microscopy using solid phase immune electron microscopy |
I |
5 |
Sep 07 |
|
Isolation of herpes simplex virus associated with herpes genitalis |
I |
4 |
Jul 07 |
|
Complement fixation tests |
I |
2 |
Jul 06 |
|
Nucleic acid extraction by the Boom method |
WD |
N/A |
N/A |
|
Isolation of Viruses associated with infections of the eye: Keratoconjunctivitis |
I |
2 |
Feb 07 |
|
Immunofluorescence and isolation of viruses from respiratory samples |
I |
1 |
Jul 07 |
|
Investigation of human herpes viruses (excluding herpes genitalis) |
I |
2 |
Feb 06 |
|
Isolation of enteroviruses and parechoviruses |
I |
2 |
May 06 |
|
Real-Time Quadriplex PCR for the detection of Influenza |
C |
1 |
Nov 06 |
|
Epstein-Barr Virus serology (formerly VSOP 6.2) |
I |
3 |
Mar 08 |
|
Hepatitis A virus acute infection serology (formerly VSOP6.3) |
I |
2.4 |
Oct 07 |
|
Cytomegalovirus serology (formerly VSOP6.4) |
I |
2.4 |
Oct 07 |
|
Investigation of erythrovirus (parvovirus) B19 in pregnant women exposed to rash illness |
UR |
N/A |
N/A |
|
Management of confirmed erythrovirus (parvovirus) B19 infection in pregnancy |
UR |
N/A |
N/A |
|
Investigation of rubella in pregnant women of unknown rubella immunity status exposed to rash illness |
UR |
N/A |
N/A |
|
Pregnant patient in contact with rash illness |
I |
2.2 |
May 05 |
|
Investigation of pregnant patient with rash illness |
I |
2.2 |
May 05 |
|
Investigation of Cytomegalovirus infection by Roche Lightcycler PCR |
I |
2.1 |
Aug 07 |
|
Operation of the Roche MagNA Pure LC automated nucleic acid extraction robot |
I |
2 |
May 06 |
|
Chlamydia Infection - Testing by Nucleic Acid Amplification Test (NAATs) |
I |
2.1 |
Sep 08 |
|
Detection of SARS-CoV by reverse transcription PCR |
C |
1.2 |
May 05 |
|
Procedure for the care and propagation of cell cultures for virus isolation |
I |
1 |
May 06 |
|
RT-PCR (Block Based) for Influenza H5 viruses |
I |
3.3 |
Nov 06 |
|
Real-Time RT-PCR (Taq Man) for influenza A H5 viruses |
I |
4.1 |
May 06 |
|
RT-PCR for the detection of influenza A viruses |
I |
1.3 |
May 06 |
|
Investigation of viral encephalitis |
UR |
N/A |
N/A |
|
Serological Diagnosis of Syphilis |
I |
1 |
Nov 07 |
|
Haemadsorption of viruses |
I |
1 |
Aug 06 |
|
European Real-Time RT-PCR for Influenza A H5 viruses |
I |
1.1 |
May 06 |
Number of Issued Virology SOPs: 32
National Standard Methods - Water
Ref No |
Title |
Status |
Issue No |
Issue Date |
General technique for the detection and enumeration of bacteria by negative pressure membrane filtration |
I |
4.1 |
Apr 07 |
|
Enumeration of coliform bacteria and Escherichia coli by membrane filtration |
I |
4.1 |
Oct 07 |
|
Enumeration of enterococci by membrane filtration |
I |
3 |
Aug 06 |
|
Aerobic colony count by the pour plate method |
I |
4.2 |
Aug 08 |
|
Enumeration of Clostridium perfringens by membrane filtration |
I |
3.1 |
May 05 |
|
Enumeration of Pseudomonas aeruginosa by membrane filtration |
I |
3 |
Dec 07 |
|
Detection of Salmonella species |
I |
3 |
Jul 06 |
|
Detection of Campylobacter species in water |
I |
3 |
Oct 07 |
|
Enumeration of Aeromonas species by membrane filtration |
I |
1.3 |
May 05 |
|
Enumeration of Staphylococcus aureus by membrane filtration |
I |
3.3 |
May 05 |
|
Detection and enumeration of Legionella species by filtration and centrifugation |
I |
1.2 |
Aug 06 |
|
Detection and enumeration of Legionella species by centrifugation |
I |
1.2 |
Aug 06 |
|
Detection and enumeration of Legionella species by positive pressure membrane filtration |
I |
1.2 |
Aug 06 |
|
Detection and enumeration of Legionella species in biofilms and sediments |
I |
1.2 |
Aug 06 |
|
Detection of Escherichia coli O157 by automated immunomagnetic separation |
I |
4 |
Mar 06 |
|
Isolation and identification of Acanthamoeba species |
I |
2.3 |
May 05 |
|
Enumeration of coliforms and Escherichia coli by Idexx (Colilert 18) Quanti-TrayTM |
I |
2.3 |
May 05 |
|
Enumeration of viable micro-organisms: Aerobic colony count by membrane filtration method |
I |
1 |
Dec 07 |
Number of Issued Water SOPs: 18